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D-I-TASSER Outperforms AlphaFold? A New Frontier in Protein Structure Modeling

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D-I-TASSER Outperforms AlphaFold? A New Frontier in Protein Structure Modeling

D-I-TASSER Outperforms AlphaFold? A New Frontier in Protein Structure Modeling

Deotima Chakraborty - May 29, 2025
Unlocking Biomolecular Secrets with AF3Score: A Leap Forward in Structural Evaluation

Unlocking Biomolecular Secrets with AF3Score: A Leap Forward in Structural Evaluation

Overlapping Genes, Unfolding Insights: Synthetic Biology Meets AI

Overlapping Genes, Unfolding Insights: Synthetic Biology Meets AI

PhysDock: A New Era in Protein-Ligand Docking with AI and Physics

PhysDock: A New Era in Protein-Ligand Docking with AI and Physics

Advancing Enzyme Design: RFdiffusion2 Enables Atomic-Level Scaffold Generation

Advancing Enzyme Design: RFdiffusion2 Enables Atomic-Level Scaffold Generation

Binding Site-Driven Molecule Design: BindGPT's Language Modeling and Reinforcement Learning Powered Generative Framework

Binding Site-driven Molecule Design: BindGPT’s Language Modeling and Reinforcement Learning Powered...

CBIRT - June 19, 2024 0
Can Diffusion Models Crack the Protein Structure and Docking Code?

Can Diffusion Models Crack the Protein Structure and Docking Code?

CBIRT - June 19, 2024 0
Introducing the Personal Health LLM: A New Era of Data-Driven Wellness Insights

Introducing the Personal Health LLM: A New Era of Data-Driven Wellness...

CBIRT - June 18, 2024 0
Indexing Nature's Code: A 'Google for DNA' to Catalog All Known Biological Sequences

Indexing Nature’s Code: A ‘Google for DNA’ to Catalog All Known...

CBIRT - June 15, 2024 0
Proteome-Wide PPI Screening: AlphaFastPPi Paves the Way for Large-Scale Studies

Proteome-wide PPI Screening: AlphaFastPPi Paves the Way for Large-scale Studies

Deotima Chakraborty - June 13, 2024 0
BioNeMo Folds the Human Proteome: A Fused Dataset of 3D Protein Models for Machine Learning Applications

BioNeMo Folds the Human Proteome: A Fused Dataset of 3D Protein...

Anchal Negi - June 13, 2024 1
Machine Learning Unveils a Million Potential Antimicrobial Peptides in the Global Microbiome

Machine Learning Unveils a Million Potential Antimicrobial Peptides in the Global...

Deotima Chakraborty - June 12, 2024 0
Advancing Pharmaceutical and Industrial Protein Engineering with StructureGPT's Innovative Structure-to-Sequence Translation Capabilities

Advancing Pharmaceutical and Industrial Protein Engineering with StructureGPT’s Innovative Structure-to-Sequence Translation...

Deotima Chakraborty - June 10, 2024 0
The AI Behind the Breakthroughs: Meta Llama 3 NIM and the Future of Healthcare and Life Sciences

The AI Behind the Breakthroughs: Meta Llama 3 NIM and the...

Anchal Negi - June 10, 2024 1
Charting the Protein Universe with ProTrek's Tri-Modal Contrastive Learning

Charting the Protein Universe with ProTrek’s Tri-Modal Contrastive Learning

Anshika Gupta - June 9, 2024 0
Leveraging AlphaFold, Rosetta, and Replica-Exchange for Reliable Protein-Protein Docking with AlphaRED

Leveraging AlphaFold, Rosetta, and Replica-Exchange for Reliable Protein-Protein Docking with AlphaRED

Deotima Chakraborty - June 8, 2024 0
MultiRNAflow: A Comprehensive Tool for Temporal RNA-Seq Data Analysis in Multiple Biological Conditions

MultiRNAflow: A Comprehensive Tool for Temporal RNA-seq Data Analysis in Multiple...

Deotima Chakraborty - June 7, 2024 0
Simplifying Single-cell Metadata Exploration with LotOfCells

Simplifying Single-cell Metadata Exploration with LotOfCells

Anchal Negi - June 6, 2024 0
Outsmarting the Malaria Parasite: SMART Researchers Decode the Mystery of Drug Resistance Mechanism

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Anshika Gupta - June 4, 2024 0
No Coding Required! SaprotHub Brings Protein Modeling to Every Biologist

No Coding Required! SaprotHub Brings Protein Modeling to Every Biologist

Deotima Chakraborty - June 4, 2024 0
Breaking New Ground in RNA Structure and Sequence Design with RNAFlow

Breaking New Ground in RNA Structure and Sequence Design with RNAFlow

Anchal Negi - June 3, 2024 1
Oxford Researchers Develop Game-changing Small Molecule to Suppress the Evolution of Antibiotic Resistance

Oxford Researchers Develop Game-changing Small Molecule to Suppress the Evolution of...

Anshika Gupta - June 2, 2024 0
Genie 2 architecture (top), which extends Genie to enable scaffolding on (multiple) motifs.

Scaling Protein Design and Scaffolding to the Structural Universe with Genie...

Deotima Chakraborty - June 1, 2024 0
GeneFormer: A Transformer-based Approach for Efficient Gene Data Compression

GeneFormer: A Transformer-based Approach for Efficient Gene Data Compression

Anchal Negi - June 1, 2024 0
Predicting ligand-specific protein-ligand complex structure with DynamicBind: A Novel Deep Equivariant Generative Model

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Anshika Gupta - May 31, 2024 0
The Promise and Reality of AI-discovered Drugs: A Look at Early Clinical Trial Success

The Promise and Reality of AI-discovered Drugs: A Look at Early...

Anchal Negi - May 30, 2024 0
Accelerating Drug Discovery with QComp's Innovative QSAR-based Data Completion Framework

Accelerating Drug Discovery with QComp’s Innovative QSAR-based Data Completion Framework

Anshika Gupta - May 29, 2024 0
The False Positive Problem in Drug Discovery: Can ChemFH Be the Solution?

The False Positive Problem in Drug Discovery: Can ChemFH Be the...

CBIRT - May 28, 2024 0
Can Deep Learning Methods Tackle Practical Protein-Ligand Docking Challenges? Introducing PoseBench to the Challenge

Can Deep Learning Methods Tackle Practical Protein-Ligand Docking Challenges? Introducing PoseBench

Anchal Negi - May 27, 2024 0
ProteinDPO: A Novel Technique for Aligning Generative Protein Models with Experimental Fitness

ProteinDPO: A Novel Technique for Aligning Generative Protein Models with Experimental...

Anshika Gupta - May 27, 2024 0
Top 10 AI-Enabled Breakthroughs in Bioinformatics

Top 10 Breakthroughs Enabled by AI in Bioinformatics

Anchal Negi - May 26, 2024 2
Microsoft Unveils GigaPath: First Whole-slide Foundation Model for Real-World Digital Pathology

Microsoft Unveils GigaPath: First Whole-slide Foundation Model for Real-World Digital Pathology

Deotima Chakraborty - May 25, 2024 0
Can We Truly Understand Proteins Through Text? ProtT3 Says Yes!

Can We Truly Understand Proteins Through Text? ProtT3 Says Yes!

Anshika Gupta - May 24, 2024 0
Decoding VEXAS Syndrome: How Single-Cell Genotype-Phenotype Mapping Identifies New Treatment Avenues

Decoding VEXAS Syndrome: How Single-Cell Genotype-Phenotype Mapping Identifies New Treatment Avenues

Deotima Chakraborty - May 23, 2024 0
StarFunc: Revolutionizing Protein Function Prediction Leveraging Template-based and Deep Learning Approaches

StarFunc: Revolutionizing Protein Function Prediction Leveraging Template-based and Deep Learning Approaches

Anchal Negi - May 22, 2024 0
Decoding Protein Function with ProteinCLIP: How Natural Language Enhances Protein Language Models

Decoding Protein Function with ProteinCLIP: How Natural Language Enhances Protein Language...

Deotima Chakraborty - May 21, 2024 0
SYNY: A Powerful Pipeline for Investigating and Visualizing Genome Collinearity

SYNY: A Powerful Pipeline for Investigating and Visualizing Genome Collinearity

Anchal Negi - May 21, 2024 0
ESM-AA: Multi-Scale Protein Language Model for Unified Molecular Modeling

Atom-scale Precision: ESM-AA’s Multi-scale Approach to Unified Molecular Modeling

Deotima Chakraborty - May 20, 2024 0
Exploring the World of Transcriptomics: Techniques, Algorithms, and Tools

Exploring the World of Transcriptomics: Techniques, Algorithms, and Tools

Anchal Negi - May 20, 2024 1
Towards Standardization and Scalability: How Nextflow and nf-core are Empowering Bioinformatics Communities

Towards Standardization and Scalability: How Nextflow and nf-core are Empowering Bioinformatics...

Deotima Chakraborty - May 18, 2024 0
Revolutionizing Antibody Structure-based Design with AntiFold: A Breakthrough in Inverse Folding Technology

Revolutionizing Antibody Structure-based Design with AntiFold: A Breakthrough in Inverse Folding...

Anshika Gupta - May 18, 2024 0
Revolutionizing Biotechnology with Predictive Tools: A New Era of Discovery

Revolutionizing Biotechnology with Predictive Tools: A New Era of Discovery

Anchal Negi - May 16, 2024 0
DrugLLM - A Game-changer in Few-shot Molecule Generation Using Open Large Language Models

Unlocking New Possibilities in Drug Design: DrugLLM’s Novel Approach to Few-Shot...

Deotima Chakraborty - May 16, 2024 0
Unleashing the Power of Foundation Models for Cancer Imaging Biomarker Discovery

Unleashing the Power of Foundation Models for Cancer Imaging Biomarker Discovery

Anshika Gupta - May 15, 2024 0
Unveiling the Future of Transcriptomics: CELLama - A Foundation Model Revolutionizing Single Cell and Spatial Analysis

Unveiling the Future of Transcriptomics: CELLama – A Foundation Model Revolutionizing...

Deotima Chakraborty - May 14, 2024 0
Faster, More Accurate Spatial Omics: How BANKSY Streamlines Data Analysis

Faster, More Accurate Spatial Omics: How BANKSY Streamlines Data Analysis

Anchal Negi - May 14, 2024 0
Turning the Tide Against Antibiotic Resistance: Protein-BERT's Accurate and Interpretable Predictions

Turning the Tide Against Antibiotic Resistance: Protein-BERT’s Accurate and Interpretable Predictions

Anchal Negi - May 13, 2024 0
Unraveling the Mysteries of Molecular Dynamics: MDverse Sheds Light on Dark Matter

Unraveling the Mysteries of Molecular Dynamics: MDverse Sheds Light on Dark...

Deotima Chakraborty - May 13, 2024 0
The Ultimate Molecular Explorer: AlphaFold 3, DeepMind's AI Marvel to Unravel the Mysteries of All Life's Molecules

The Ultimate Molecular Explorer: AlphaFold 3, DeepMind’s AI Marvel to Unravel...

Anchal Negi - May 10, 2024 1
Designing Multi-Tasking Drugs: How POLYGON Makes Polypharmacology Easier with Deep Generative Chemistry

Designing Multi-Tasking Drugs: How POLYGON Makes Polypharmacology Easier with Deep Generative...

Deotima Chakraborty - May 9, 2024 0
Did Aquatic Algae Pave the Way for Lush Forests? New Research Suggests Yes!

Did Aquatic Algae Pave the Way for Lush Forests? New Research...

Anchal Negi - May 8, 2024 0
Decipher: A Computational Pipeline for Single-cell Profile-based Context-specific Mechanistic Insights

Deciphering the Future with Decipher: A Computational Pipeline for Single-cell Profile-based...

Deotima Chakraborty - May 8, 2024 0
A New Era of AI in Medicine: Google's Med-Gemini Sets New Standards

A New Era of AI in Medicine: Google’s Med-Gemini Sets New Standards

Deotima Chakraborty - May 6, 2024 0
Unveiling ChatNT: The Conversational AI Revolutionizing How We Explore DNA, RNA & Proteins

Unveiling ChatNT: The Conversational AI Revolutionizing How We Explore DNA, RNA...

Anchal Negi - May 6, 2024 0
REvoLd: Accelerating Drug Discovery Through Evolutionary Algorithm-Driven Ultra-Large Library Screening in Rosetta

REvoLd: Accelerating Drug Discovery Through Evolutionary Algorithm-Driven Ultra-Large Library Screening in...

Anshika Gupta - May 5, 2024 2
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