BIOINFORMATICS RESOURCES

Top bioinformatics software, tools and libraries!

List of Bioinformatics software, resources, and libraries for Bioinformatics Analysis, Data Processing, Next Generation Sequencing Data Analysis and much more.

Bioinformatics

Bioinformatics Software, Resources, and Libraries A curated list of awesome Bioinformatics software, resources, and libraries for Data Processing, Next Generation Sequencing Data Analysis and much more. Mostly command line based, and free or open-source.

pythonidae

Collection of tools and resources for bioinformatics, genomics, agriculture, food science, medicine, genetic engineering, etc.

PyRice

A Python package for query rice gene information

GEM

Genome wide Event finding and Motif discovery. High resolution peak calling and motif discovery for ChIP-seq and ChIP-exo data.

Must Read

Indexing Nature's Code: A 'Google for DNA' to Catalog All Known Biological Sequences

Indexing Nature’s Code: A ‘Google for DNA’ to Catalog All Known Biological Sequences

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Suppose there was a library where the whole instruction manual for every living organism on Earth could be found. It's not science fiction, but...
Proteome-Wide PPI Screening: AlphaFastPPi Paves the Way for Large-Scale Studies

Proteome-wide PPI Screening: AlphaFastPPi Paves the Way for Large-scale Studies

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Despite the challenge of scaling for large-scale screenings, advances in computational structural biology, like AlphaFold-Multimer, have greatly improved the understanding of protein-protein interactions across...
BioNeMo Folds the Human Proteome: A Fused Dataset of 3D Protein Models for Machine Learning Applications

BioNeMo Folds the Human Proteome: A Fused Dataset of 3D Protein Models for Machine...

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In a recent scientific breakthrough, a team of researchers from NVIDIA and Innophore, USA, came up with a holistic dataset of the predicted protein...
Machine Learning Unveils a Million Potential Antimicrobial Peptides in the Global Microbiome

Machine Learning Unveils a Million Potential Antimicrobial Peptides in the Global Microbiome

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Antibiotic resistance must be addressed immediately with novel antibiotics. By using a large dataset of 63,410 metagenomes and 87,920 prokaryotic genomes from environmental and...
Advancing Pharmaceutical and Industrial Protein Engineering with StructureGPT's Innovative Structure-to-Sequence Translation Capabilities

Advancing Pharmaceutical and Industrial Protein Engineering with StructureGPT’s Innovative Structure-to-Sequence Translation Capabilities

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Sequence-to-structure predictions are the main focus of current computational methods for reverse translation, which is the process of translating complicated protein structures into sequences....