BIOINFORMATICS TOOLS
Phylogenetic Analysis
- MEGA – Molecular Evolutionary Genetics Analysis package. It is a computer software for conducting automatic and manual sequence alignment and constructing phylogenetic trees.
- Phylip – It is a free package of programs for inferring phylogenies.
- PAML – A package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood.
- DAMBE – Software package for extensive Data Analysis in Molecular Biology and Evolution
- iTOL – Interactive Tree Of Life is an online tool for the display, annotation and management of phylogenetic and other trees.
Must Read
doubletrouble: A Comprehensive R Package for Gene Duplication Detection and Classification
A major factor in evolution, genome duplications have different effects on the expression, function, and regulation of genes. However, multiple duplication modes make it...
dnaSORA: The AI Model Making Human Genome Reading as Simple as Point Clouds
Understanding the human genome is often compared to deciphering an ancient, complex language with three billion characters. While AI has made great strides in...
Automating Complex Bioinformatics Tasks with BioMaster’s AI-Driven Framework
In the ever-evolving field of bioinformatics, automation has become a necessity for handling complex genomic data efficiently. A recent study by researchers at Hong...
Revolutionizing Cancer Diagnosis and Treatment: The Transformative Role of AI in Oncology
Artificial intelligence is revolutionizing the diagnosis, treatment, and treatment of cancer. AI overcomes the drawbacks of traditional diagnostic methods by increasing accuracy to optimize...
NuFold: A Revolutionary Leap in RNA Tertiary Structure Prediction
RNA, often overshadowed by its protein counterpart, plays an essential role in the molecular machinery of life. Predicting RNA’s three-dimensional (3D) structure is a...