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Saturday, January 29, 2022

BIOINFORMATICS TOOLS

Gene Prediction

  • GENEID – A program to predict genes, exons, splice sites and other signals along a DNA sequence.
  • AUGUSTUS – Program that predicts genes in eukaryotic genomic sequences.
  • EuGene – Integrative gene finder for eukaryotic and prokaryotic genomes.
  • PseudoPipe – A stand alone computational pipeline for pseudogene annotation.
  • GenScan – Web server for the identification of complete gene structures in genomic DNA.
  • HMMgene – 1.1 – Program for prediction of vertebrate and C. elegans genes.

Must Read

Microbiome

A New Sequencing Technique Developed for Low-Biomass, Degraded, or Contaminated Microbiome Samples

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A low-cost metagenome sequencing technology has been developed by scientists from the Chinese Academy of Sciences' Qingdao Institute of Bioenergy and Bioprocess Technology (QIBEBT)....
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Safely Inserting Therapeutic Genes into the Human DNA

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Researchers from Harvard's Wyss Institute, Harvard Medical School, and the ETH Zurich have predicted and validated genetic safe harbors for therapeutic genes, making gene...
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Expanding the View of how Mutations Impact Cells with a High-throughput Approach ‘Perturb-seq’

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Scientists from Broad Institute of MIT and Harvard, discovered an approach to study functional implications of the millions of mutations linked to cancer by...
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EMBL’s Scientists Modeled Molecular Complexes Inside Cells at Atomic Resolution Using Modern Software and...

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To better comprehend the function of cells, scientists examine how different components of a cell – from single molecules to several organelles – work...
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‘Valves in DNA’ Created to Shape the Flow of Biological Information

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New biological components developed by scientists at the University of Bristol can alter the flow of cellular activities along DNA. The scientists provide new insights...
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