Saturday, December 10, 2022

BIOINFORMATICS TOOLS

Gene Prediction

  • GENEID – A program to predict genes, exons, splice sites and other signals along a DNA sequence.
  • AUGUSTUS – Program that predicts genes in eukaryotic genomic sequences.
  • EuGene – Integrative gene finder for eukaryotic and prokaryotic genomes.
  • PseudoPipe – A stand alone computational pipeline for pseudogene annotation.
  • GenScan – Web server for the identification of complete gene structures in genomic DNA.
  • HMMgene – 1.1 – Program for prediction of vertebrate and C. elegans genes.

Must Read

Overview of the full workflow and tools performed by TransFlow (Transmission Workflow).

TransFlow: a Fast and Efficient Snakemake Workflow for Whole Genome Sequencing Based Transmission Analysis...

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TransFlow (Transmission Workflow), a convenient, quick, effective, and thorough WGS-based transmission analysis pipeline, is presented by Chinese researchers. TransFlow integrates a number of cutting-edge...
Federated Machine Learning Powers the Biggest Brain Tumor Study to Date while Protecting Patient's Data

Federated Machine Learning Powers the Biggest Brain Tumor Study to Date while Protecting Patient’s...

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Federated machine learning enables the largest brain tumor study ever conducted without sharing patient data by allowing researchers to securely analyze distributed datasets while...
MIT Researchers Used Large Language Models to Decode Electronic Health Records.

MIT Researchers Used Large Language Models to Decode Clinical Health Records in Few Shots

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Researchers from MIT CSAIL employed a potent deep-learning model to extract crucial information from electronic health records that might help with personalized medicine. The adoption...
Hidden Patterns Involved In Patients With Multimorbidities

UCL Researchers Unraveled the Hidden Patterns Involved in Patients with Multimorbidities

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Researchers at University College London discovered multimorbidity and comorbidity illness trends using a dataset spanning 3.8 million patients in England. Patients and clinicians can...
A multi omics approach to earth's microbiomes project

A Multi-Omics Approach to Earth’s Microbiomes Project Demonstrates Microbial and Metabolite Diversity

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Contrasting sharply with the little knowledge of the microbial world's underlying structure is the rising awareness of its significance and variety. Despite recent developments...