BIOINFORMATICS TOOLS

Gene Prediction

  • GENEID – A program to predict genes, exons, splice sites and other signals along a DNA sequence.
  • AUGUSTUS – Program that predicts genes in eukaryotic genomic sequences.
  • EuGene – Integrative gene finder for eukaryotic and prokaryotic genomes.
  • PseudoPipe – A stand alone computational pipeline for pseudogene annotation.
  • GenScan – Web server for the identification of complete gene structures in genomic DNA.
  • HMMgene – 1.1 – Program for prediction of vertebrate and C. elegans genes.

Must Read

DeepMind AlphaGenome Atlas

Google DeepMind Launches AlphaGenome Atlas Covering 9 Billion Possible DNA Variants

0
According to Google DeepMind's official blog, the company has released AlphaGenome Atlas, a free platform offering precomputed predictions for the molecular effects of all...
Rosalind Workbench: OpenAI Connects AI, Genomics, and Scientific Workflows

Rosalind Workbench: OpenAI Connects AI, Genomics, and Scientific Workflows

0
OpenAI has introduced Rosalind Workbench, a new research-preview environment available through the ChatGPT app that brings scientific tools, specialized biology models, and data workflows...
GlucoFM's foundation model architecture for continuous glucose monitoring data

GlucoFM: Google’s New Foundation Model Reads Glucose Data Like a Language

0
Wearables have gotten remarkably good at estimating how much we move and how well we sleep. But glucose regulation — the hidden machinery behind...
Scientists Build a Near-Perfect Telomere-to-Telomere Diploid Human GenomeScientists Build a Near-Perfect Telomere-to-Telomere Diploid Human Genome

Scientists Create a Near-Perfect Telomere-to-Telomere Diploid Human Genome Benchmark for Personalized Genomics

0
For years, genomics has had a dirty little secret: even our best reference genomes have gaps. Now, a large international team of the National...
NovoTags

NovoTags: How AI-Designed Proteins Are Giving Scientists a Sharper View Inside Living Cells

0
Imagine trying to identify every resident of a bustling metropolis from a rooftop, at night, with only a handful of flashlights. That's essentially the...