BIOINFORMATICS TOOLS

Gene Prediction

  • GENEID – A program to predict genes, exons, splice sites and other signals along a DNA sequence.
  • AUGUSTUS – Program that predicts genes in eukaryotic genomic sequences.
  • EuGene – Integrative gene finder for eukaryotic and prokaryotic genomes.
  • PseudoPipe – A stand alone computational pipeline for pseudogene annotation.
  • GenScan – Web server for the identification of complete gene structures in genomic DNA.
  • HMMgene – 1.1 – Program for prediction of vertebrate and C. elegans genes.

Must Read

Antimicrobial Resistance (AMR)

Can Machine Learning Forecast Antibiotic Resistance Trends Across the Globe?

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Antimicrobial resistance (AMR) has quietly become one of the defining health crises of our time, undermining the effectiveness of life-saving medicines and putting decades...
From Natural Language to Biological Design: How Proto Powers Generative Biology

From Natural Language to Biological Design: How Proto Powers Generative Biology

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A structured program produced genetic sequences that don't exist in nature — then those sequences were built, tested in human cells, and found to...
Genesis AI - DeCAF

DECAF: Genesis AI-Based Framework for Faster and Computationally Efficient All-Atom Protein Cofolding

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The high computational cost of generating accurate atomic-level biomolecular structures remains a major challenge in AI-driven drug discovery. Researchers from Genesis Molecular AI, MIT,...
BoltzMol-1, BoltzProt-1, and a New API for Small Molecule Hit Discovery and Protein Design

Boltz Launches BoltzMol-1, BoltzProt-1, and a New API for Small Molecule Hit Discovery and...

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Drug discovery has always been brutally slow. You pick a target, screen hundreds of thousands of compounds, watch most of them fail, spend months...
Transferable Implicit Operators (TITO).

What If Molecular Simulations Could Run 10,000 Times Faster?

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Conventional molecular dynamics (MD) simulations provide atomistic insights into molecular behavior but are fundamentally limited by their femtosecond time steps, making it computationally challenging...