Bioinformatics
Bioinformatics Software, Resources, and Libraries A curated list of awesome Bioinformatics software, resources, and libraries for Data Processing, Next Generation Sequencing Data Analysis and much more. Mostly command line based, and free or open-source.
Collection of tools and resources for bioinformatics, genomics, agriculture, food science, medicine, genetic engineering, etc.
Genome wide Event finding and Motif discovery. High resolution peak calling and motif discovery for ChIP-seq and ChIP-exo data.
Must Read
Claude Opus 4.5 and the Future of AI-Driven Research in Healthcare and Biotechnology
The growing complexity of biomedical research and healthcare demands AI systems that can go beyond general assistance to support end-to-end scientific workflows. Building on...
DrugCLIP Enables High-Throughput Virtual Screening Across the Human Proteome
Researchers at Tsinghua University have introduced DrugCLIP, a contrastive learning framework that enables ultrafast and accurate virtual screening at a genome-wide scale. Published in...
Beyond the Sequence: How FoldMason is Redefining Multiple Protein Structure Alignment at Scale
The authors at Seoul National University developed FoldMason, a free, open-source, progressive Multiple Structural Alignment (MSTA) method published in Science that uses a structural...
De Novo Peptide Binder Generation: How moPPIt Targets ‘Undruggable’ Proteins
Authors from the University of Pennsylvania and others innovated the motif-specific PPI targeting algorithm (moPPIt), a computational framework that integrates BindEvaluator along with Multi-Objective...
Generating DNA Sequences Using AI: DNA-Diffusion Promises Effective Gene Therapy
The researchers at Broad Institute and Mass General Brigham in Nature Genetics propose DNA-Diffusion, the first ever generative diffusion framework trained on DNA accessibility...