Friday, February 21, 2025

Top bioinformatics software, tools and libraries!

List of Bioinformatics software, resources, and libraries for Bioinformatics Analysis, Data Processing, Next Generation Sequencing Data Analysis and much more.

Bioinformatics

Bioinformatics Software, Resources, and Libraries A curated list of awesome Bioinformatics software, resources, and libraries for Data Processing, Next Generation Sequencing Data Analysis and much more. Mostly command line based, and free or open-source.

pythonidae

Collection of tools and resources for bioinformatics, genomics, agriculture, food science, medicine, genetic engineering, etc.

PyRice

A Python package for query rice gene information

GEM

Genome wide Event finding and Motif discovery. High resolution peak calling and motif discovery for ChIP-seq and ChIP-exo data.

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Google Launches AI Co-Scientist: A Virtual Partner for Smarter and Faster Research Powered by Gemini 2.0

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MIT's ChromoGen: From DNA Sequence to 3D Structure in Minutes

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Microscopic imaging and high-throughput sequencing methods show that chromatin structures differ greatly between cells, although characterization is still difficult because of the labor-intensive nature...
GenomeOcean: A Powerful Genome Foundation Model for Large-Scale Metagenomic Research

GenomeOcean: A 4B-Parameter Genome Foundation Model Advancing Metagenomics, Drug Discovery, and Synthetic Biology

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The field of bioinformatics is witnessing a major transformation with the development of genome foundation models. In a recent study conducted by researchers from...
How Directed Evolution and Machine Learning Enhance Genotype-to-Phenotype Mapping

How Directed Evolution and Machine Learning Enhance Genotype to Phenotype Mapping

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It is essential to connect sequence variation to phenotypic effects to effectively utilize huge genomic datasets. Here, researchers describe a unique method for characterizing...