computational pipeline

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Accurate Annotation of Eukaryotic Genomes Made Easy: The BRAKER3 Advantage
ByPrachi Khare September 25, 2023September 30, 2023

Researchers from the University of Greifswald, Germany, introduced a new version of the BRAKER software BRAKER3, notably improving the annotation of eukaryotic genomes. Its superior performance in eukaryotic genome annotation, particularly for species with large and complex genomes, signifies a promising advancement in bioinformatics with far-reaching implications for genomic research and applications in diverse fields….

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Bioinformatics | Cancer Research | Data Science | News | NGS | RNA-Seq | Trending

Scientists Developed a Versatile Pipeline ‘scAmpi’ for Single-cell RNA-seq Data Analysis from Basics to Clinics
ByTanveen Kaur August 17, 2022August 17, 2022

Scientists from the Swiss Institute of Bioinformatics devise a workflow known as Single Cell Analysis mRNA Pipeline, ‘scAmpi,’ for providing complete functionality to scRNA-seq data analysis. In order to understand tissue composition at the single-cell level, to shed light on disease processes, tumor heterogeneity, and the condition of the immune milieu, single-cell RNA sequencing (scRNA-seq) has…

Read More Scientists Developed a Versatile Pipeline ‘scAmpi’ for Single-cell RNA-seq Data Analysis from Basics to Clinics
Bioinformatics | Featured | News | OMICS | Paper Summary | RNA-Seq | Trending

INTEGRATE: A Computational Pipeline for Integrating Multi-Omics Data to Characterize Multi-Level Metabolic Regulation
BySwati Yadav February 20, 2022November 8, 2022

Scientists at The University of Milan-Bicocca, Milan, Italy, have proposed INTEGRATE, a computational pipeline that incorporates metabolomics and transcriptomics data, by applying constraint-based stoichiometric metabolic models as a scaffold. The pipeline might aid in developing personalized treatments for people suffering from complicated disorders. From cancer to neurodegeneration and aging, many physio-pathological states and multifactorial disorders…

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