Clustering Algorithm

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CellHint Revolutionizes Human Cell Atlas: Automatic Cell Type Harmonization Paves the Way for New Discoveries
BySonal Keni December 29, 2023January 4, 2024

Over the past few years, a large number of single-cell genomics datasets that profile a range of tissues in different stages of development have been created. These resources have been incorporated in the creation of a standard reference map for human bodies by consortia like the Human Cell Atlas. However, different labs may have different…

Read More CellHint Revolutionizes Human Cell Atlas: Automatic Cell Type Harmonization Paves the Way for New Discoveries
AMR Alert | Big Data | Bioinformatics | Genomics | News | Paper Summary | Sequencing

Meet ggCaller: A Fast and Accurate Solution for Pangenome Annotation and Clustering
ByPrachi Khare October 25, 2023October 25, 2023

Pangenomic annotation is critical for understanding the bacterial genomic variety and depends on recognizing core and accessory genes through gene prediction and clustering. These are vital for characterization and epidemiological examinations. Accessory genes tracked down in unambiguous subsets are related to attributes like antimicrobial opposition, harmfulness, and immunization escape. Current techniques include quality forecast and…

Read More Meet ggCaller: A Fast and Accurate Solution for Pangenome Annotation and Clustering
AI | Bioinformatics | News | Paper Summary | Structural Biology | Trending

Massive Structural Clustering of the AlphaFold Database using Foldseek Cluster Reveals New Insights into Protein Structure and Evolution
ByPrachi Khare October 7, 2023October 8, 2023

Hundreds of millions of protein structures can be clustered using the new AI algorithm “Foldseek Cluster,” which was developed by a team of researchers from EMBL-EBI, the Institute of Molecular Systems Biology at ETH Zurich, and Seoul National University. Researchers used Foldseek Cluster for clustering the entire AlphaFold database, identifying 2.3 million non-singleton structural clusters,…

Read More Massive Structural Clustering of the AlphaFold Database using Foldseek Cluster Reveals New Insights into Protein Structure and Evolution

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Clustering Algorithm

Meet ggCaller: A Fast and Accurate Solution for Pangenome Annotation and Clustering

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