Our Services
CBIRT's bioinformatics team works alongside academic labs, biotech startups, and life-science researchers to turn sequencing data and structural questions into clear, reproducible, publication-ready findings — from a single dataset to a full custom pipeline.
Bioinformatics Services, Organized Around Your Workflow
Whether you're starting from raw FASTQ files, a protein structure, or just a research question, our services are grouped by the kind of problem they solve — and can be combined into a single project.
From FASTQ to Biological Insight
Comprehensive analysis of next-generation sequencing data — alignment, quality control, and the statistical and functional interpretation behind it.
End-to-end transcriptome analysis to quantify gene expression, detect differentially expressed genes, and uncover the pathways driving your condition of interest.
Comprehensive variant discovery across the entire genome — SNPs, indels, copy-number and structural variants — with annotation and prioritization for your research question.
Targeted analysis of the protein-coding genome, optimized for identifying functionally relevant and disease-associated variants in research-grade workflows.
Resolve cellular heterogeneity within your sample — from quality control and clustering to cell-type annotation and trajectory/pseudotime analysis.
Characterize microbial communities from amplicon (16S / 18S / ITS) or shotgun metagenomic data, including diversity and functional potential.
Characterize microbial communities from amplicon (16S / 18S / ITS) or shotgun metagenomic data, including diversity and functional potential.
Understanding Molecules in 3D
Structure-based analyses for proteins, ligands, and their interactions — built for drug discovery, mechanism studies, and structural validation.
Generate reliable 3D structural models of proteins using homology modeling and modern AI-based structure prediction, with thorough validation and refinement.
Predict how small molecules, peptides, or proteins interact with your target, and rank candidate ligands by binding mode and predicted affinity.
Probe the dynamic behavior of proteins and protein-ligand complexes over time to assess stability, conformational change, and binding free energy.
Workflows Built Around Your Question
For projects that don't fit a single standard pipeline — tailored development and discovery-focused analyses designed with your end goal in mind.
We design and build reproducible, scalable analysis pipelines tailored to your data types and research workflow, packaged for easy reuse and handover.
Integrate genomic, transcriptomic, and clinical data to identify and prioritize candidate biomarkers or therapeutic targets, with a roadmap for validation.
A Clear Path From Dataset to Report
Every project follows the same straightforward sequence, so you always know what's happening and what comes next.
A Research-First Bioinformatics Partner
CBIRT team has spent years in research — that same rigor and curiosity carries into every service we deliver.
Have a Dataset Waiting?
Tell us about your project, organism, data type, and goals — we'll get back to you with a scoping plan, timeline, and estimate.
Contact us
Want to get in touch? We make it our priority to respond to every request within 24h.