Data analysis services
Bioinformatics analysis for research labs and biotech teams
We turn sequencing data and structural questions into clear, reproducible, publication-ready findings — from a single dataset to a full custom pipeline.
Every project includes
- Detailed analysis report
- All code and pipeline files
- Publication-ready figures
- Support for follow-up questions
Service catalog
Services organized around your workflow
Start from raw FASTQ files, a protein structure or just a research question. Services can be combined into a single project.
01Sequencing & omics
From FASTQ to biological insight
Alignment, quality control, and the statistical and functional interpretation behind your sequencing data.
RNA-Seq Analysis
End-to-end transcriptome analysis to quantify gene expression, detect differentially expressed genes, and uncover the pathways driving your condition of interest.
Whole Genome Sequencing (WGS)
Variant discovery across the entire genome — SNPs, indels, copy-number and structural variants — with annotation and prioritization for your research question.
Whole Exome Sequencing (WES)
Targeted analysis of the protein-coding genome, optimized for identifying functionally relevant and disease-associated variants.
Single-Cell RNA-Seq
Resolve cellular heterogeneity — from quality control and clustering to cell-type annotation and trajectory/pseudotime analysis.
Metagenomics (16S / Shotgun)
Characterize microbial communities from amplicon (16S / 18S / ITS) or shotgun metagenomic data, including diversity and functional potential.
Epigenomics
DNA methylation, ChIP-Seq and ATAC-Seq analysis to map regulatory marks and chromatin accessibility across conditions.
02Structural & computational biology
Understanding molecules in 3D
Structure-based analyses for proteins, ligands and their interactions — for drug discovery, mechanism studies and structural validation.
Protein Modeling
Reliable 3D models using homology modeling and AI-based structure prediction, with thorough validation and refinement.
Molecular Docking
Predict how small molecules, peptides or proteins interact with your target, and rank candidates by binding mode and predicted affinity.
MD Simulation
Probe the dynamics of proteins and protein–ligand complexes over time to assess stability, conformational change and binding free energy.
03Discovery & custom solutions
Workflows built around your question
For projects that don’t fit a single standard pipeline — tailored development and discovery-focused analyses.
Custom Pipeline Development
Reproducible, scalable pipelines tailored to your data types and workflow, packaged for easy reuse and handover.
Biomarker & Target Discovery
Integrate genomic, transcriptomic and clinical data to identify and prioritize candidate biomarkers or therapeutic targets, with a roadmap for validation.
How we work
A clear path from dataset to report
01
Consultation & scoping
We discuss your research question, data type and goals, then agree the analysis plan, deliverables and timeline before any work begins.
02
Data submission & QC
You share raw data securely by your preferred method; we run quality control and flag any issues before analysis starts.
03
Analysis & iteration
We run the agreed pipeline, share interim results for your feedback, and refine the analysis as the picture becomes clearer.
04
Delivery & support
You receive a detailed report, all code and pipeline files, publication-ready figures, and support for follow-up questions.
Why CBIRT
A research-first bioinformatics partner
Research-grade rigor
Built by a team active in bioinformatics research, training and scientific publishing — methods chosen for correctness, not convenience.
Open & reproducible
Open-source, well-documented tools, so every result can be independently verified, rebuilt and extended by your team.
End-to-end support
From first consultation to post-delivery questions, you work with the same team — no hand-offs, no lost context.
Flexible engagement
From a single dataset to an ongoing collaboration — scaled to your project, timeline and budget.
Join our analyst network
Work with CBIRT as a freelance data analyst
We collaborate with experienced bioinformaticians on client projects across omics, structural biology and custom pipelines. Remote, project-based work with a clear scope for every engagement.
Request a quote
Have a dataset waiting?
Tell us about your project, organism, data type and goals — we’ll reply with a scoping plan, timeline and estimate.
- Reply within 24 hoursto every request
Prefer email? support@cbirt.net
Call +91 63981 42849