ChromoMap is a fast and easy-to-use tool for visualizing genomic elements and related data (such as multi-omics data) in relation to their chromosome-by-chromosome occurrence for any genome assembly.
ChromoMap provides customizable displays that allow for the comparison of data individually connected with each strand of a specific chromosome, as well as homologous chromosomes of any size. Individual viewing of multi-omics data in all homologous chromosomes of phased diploid/polyploid genomes is also possible with ChromoMap.
The package ChromoMap and its documentation are available under the GPL-3 Open Source license from: https://CRAN.R-project.org/package=chromoMap
Story Source: Anand, L., Rodriguez Lopez, C.M. ChromoMap: an R package for interactive visualization of multi-omics data and annotation of chromosomes. BMC Bioinformatics 23, 33 (2022). https://doi.org/10.1186/s12859-021-04556-z